1.Chia-Chi Hsu, Shu-Yun Chen, Shang-Yi Chiu, Cheng-Yuan Lai, Pei-Han Lai, Tariq Shehzad, Wen-Luan Wu, Wen-Huei Chen, Andrew H. Paterson and Hong-Hwa Chen. (2022, Mar.) High-density genetic map and genome-wide association studies of aesthetic traits in Phalaenopsis orchids. Sci. Report, 12:3346 (co-first author)
2.Shu‐Yun Chen, Yan‐Jeng Wu, Ting‐Fang Hsieh, Jiunn‐Feng Su, Wei‐Chiang Shen, Yung‐Hsiang Lai, Pen‐Chih Lai, Wen‐Huei Chen and Hong‐Hwa Chen (2021, Mar). Develop an efficient inoculation technique for Fusarium solani isolate “TJP-2178-10” pathogeny assessment in Phalaenopsis orchids. Botanical Studies, 62:4-11. (First author).
3.Chia-Chi Hsu, Shu-Yun Chen, Pei-Han Lai, Yu-Yun Hsiao, Wen-Chieh Tsai, Zhong-Jian Liu, Mei-Chu Chung, Olivier Panaud and Hong-Hwa Chen (2020, Nov). Identification of high-copy number long terminal repeat retrotransposons and their expansion in Phalaenopsis orchids. BMC genomics, 21:807-820. (co-first author)
4.Shu-Yun Chen, Mei-Hsiu Su, Karl A. Kremling, Nicholas K. Lepak, M. Cinta Romay, Qi Sun, Peter J. Bradbury, Edward S. Buckler and Hsin-Mei Ku (2020, Oct). Identification of miRNA-eQTLs in maize mature leaf by GWAS. BMC genomics, 21:689-702. (First author).
5.Yi-Lun Liao, Wen-Shiin Lin and Shu-Yun Chen (2019, Apr). ‘Taichung No. 5’: A Short Plant Height with High Grain Yield Job’s Tears Cultivar . American
Society for Horticultural Science, 52: 761-762. (Corresponding author).
6.Karl A.G. Kremling, Shu-Yun Chen, Mei-Hsiu Su, Micholas K. Lepak, M. Cinta Romay, Kelly L. Swarts, Fei Lu, Anne Lorant, Peter J. Bradbury, Edward S. Buckler. (2018, Mar). Dysregulation of expression correlates with rare allele burden and fitness loss in maize. . Nature, 555: 520-523.
7.Wei-Ting Liu, Peng-Wen Chen, Li_Chi Chen, Chia-Chun Yang, Shu-Yun Chen, GuanFu Huang, Tzu-Che Lin, Hsin-Mei Ku and Jeremy J.W. Chen (2017, Jul). Suppressive Effect of MicroRNA319 Expression on rice plant height.. Theoretical and Applied Genetics, 130(7):1507-1518.